Yeah, it's one of those things where you're either perfectly fine with them or they absolutely wreck you. I think it mainly has to do with grip and bar position. Too many guys get locked into "I must do it this way because XYZ says to do them this way". Just do an exercise the way it feels the best and most natural to you.
The presses have been part of Olympic Lifting for years, if they were that bad for you, the hospitals would be flowing with half broken lifters.